Leo Klarner

PhD Student in AI for Drug Discovery at the University of Oxford

Developing more robust predictive and generative deep learning methods
for applications in early-stage drug discovery.

Supervised by Profs Yee Whye Teh, Charlotte Deane and Garrett Morris.

leo.klarner [AT] stats.ox.ac.uk

About

Hello! I'm a second-year PhD student at the University of Oxford, where I am exploring ways to make deep learning algorithms more robust to common challenges in early-stage drug discovery.

This requires familiarity with both cutting-edge machine learning methods and the realities of practical drug discovery, which I have picked up through supervision by Yee Whye Teh (Oxford/DeepMind), Charlotte Deane (Oxford/Exscientia) and Garrett Morris (Oxford), as well as Torsten Schindler and Michael Reutlinger (Roche).
My research is funded by a Clarendon Scholarship (Oxford's flagship academic merit scholarship for graduate students) and additional awards from Brasenose College and Roche (Open Innovation Partnership).

Before moving to Oxford, I earned a BSc. in Interdisciplinary Sciences (chemistry, biology and CS) from ETH Zurich, where I was supervised by Gisbert Schneider and Simone Schürle-Finke.

If you would like to talk about research, feel free to reach out via email, Twitter, or LinkedIn!

Publications

Metropolis Sampling for Constrained Diffusion Models

Nic Fishman, Leo Klarner, Emile Mathieu, Michael Hutchinson, Valentin de Bortoli

NeurIPS 2023

GAUCHE: A Library for Gaussian Processes in Chemistry

Ryan-Rhys Griffiths*, Leo Klarner*, Henry B. Moss*, Aditya Ravuri*, et al.

NeurIPS 2023

Diffusion Models for Constrained Domains

Nic Fishman, Leo Klarner, Valentin De Bortoli, Emile Mathieu, Michael Hutchinson

TMLR 2023

Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions

Leo Klarner, Tim G. J. Rudner, Michael Reutlinger, Torsten Schindler, Garrett M. Morris, Charlotte M. Deane, Yee Whye Teh

ICML 2023

Bias in the Benchmark: Systematic Experimental Errors in Bioactivity Databases Confound Multi-task and Meta-learning Algorithms

Leo Klarner, Michael Reutlinger, Torsten Schindler, Charlotte M. Deane, Garrett M. Morris

5th AI in Chemistry Conference, Best Poster Award
Oxford Stats Graduate Poster Session, Best Poster Award
ICML 2022 AI4Science Workshop